STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00328Pre-mRNA 3'-end-processing factor FIP1. (507 aa)    
Predicted Functional Partners:
EGR_01759
WD repeat-containing protein 33.
   
 0.999
EGR_06977
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.998
EGR_05005
Cleavage and polyadenylation specificity factor subunit.
   
 0.998
EGR_00716
Cleavage and polyadenylation specificity factor subunit.
    
 0.998
EGR_07431
Symplekin.
   
 0.997
EGR_02408
Cleavage stimulation factor subunit 3.
   
 0.995
EGR_07054
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.994
EGR_06353
Cleavage stimulation factor subunit 2 tau variant.
   
 0.990
EGR_07199
WD repeat-containing protein 82.
   
 0.987
EGR_05073
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.975
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: high (82%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.