STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_001200800Vam6:Vps39 protein. (1158 aa)    
Predicted Functional Partners:
EmuJ_001011100
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 0.999
EmuJ_000829300
Vacuolar protein sorting associated protein 18.
   
 0.998
EmuJ_000735100
Vacuolar protein sorting associated protein 11.
   
 0.998
EmuJ_001194100
Vacuolar protein sorting associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.995
EmuJ_000471800
Vacuolar protein sorting associated protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.980
EmuJ_001042700
Transforming growth factor beta.
    
 
 0.974
EmuJ_000123800
Vacuolar protein sorting associated protein 41.
   
 0.973
EmuJ_000826400
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 
 0.969
EmuJ_000477100
Vesicle transport through interaction with.
   
 
 0.965
EmuJ_000487500
Vacuolar protein sorting associated protein 8.
   
 
 0.944
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.