STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_000504600Calcium binding protein. (178 aa)    
Predicted Functional Partners:
A0A068Y6X6
Nucleotide excision repair protein.
    
 0.843
EmuJ_000794600
80 kDa MCM3 associated protein.
    
 
 0.841
EmuJ_000157950
Leucine rich repeat serine:threonine protein.
   
 0.818
EmuJ_000826200
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.817
EmuJ_001091800
55 kDa erythrocyte membrane protein; Belongs to the MAGUK family.
    
 0.817
EmuJ_000444000
Uv excision repair protein rad23 b.
   
 0.780
EmuJ_000364700
Myosin iiia.
    
 0.777
A0A068Y199
Coiled coil domain containing protein 40.
    
 0.722
EmuJ_000792000
Spindle assembly associated Sfi1.
    
 
 0.721
EmuJ_000066400
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.721
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.