STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_001017200RING box protein pip1. (108 aa)    
Predicted Functional Partners:
EmuJ_000448400
UBX.
    
 0.987
EmuJ_001185600
Cullin 1; Belongs to the cullin family.
    
 0.950
EmuJ_000981400
Cullin 2; Belongs to the cullin family.
    
 0.950
EmuJ_001098900
Elongin b.
   
 0.942
EmuJ_000763400
DNA damage binding protein 1.
    
 0.941
A0A068Y3A3
RING box protein.
  
  
 
0.940
EmuJ_000821600
NEDD8.
   
 0.939
A0A068Y1K5
Cullin 3; Belongs to the cullin family.
    
 0.938
EmuJ_000803500
NEDD8 conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.931
EmuJ_000040100
Transcription elongation factor b polypeptide 1; Belongs to the SKP1 family.
   
 0.923
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.