STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_000124700Expressed protein. (111 aa)    
Predicted Functional Partners:
A0A068Y9E9
U4:u6.u5 tri snrnp associated protein 2.
   
 0.953
EmuJ_000823100
Hypoxia associated factor.
    
 0.887
EmuJ_000150900
U6 snRNA associated Sm protein LSm7.
    
 0.877
EmuJ_000792350
U4:U6 small nuclear ribonucleoprotein Prp4.
   
  0.872
EmuJ_000181000
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.853
EmuJ_000727000
RNA binding protein 42.
    
  0.847
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
  0.843
EmuJ_000886700
Small nuclear ribonucleoprotein Sm D3.
   
 0.838
EmuJ_000866000
Small nuclear ribonucleoprotein G.
   
 0.831
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.828
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.