STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_000226400E3 ubiquitin protein ligase RNF168. (273 aa)    
Predicted Functional Partners:
EmuJ_000106000
E3 ubiquitin protein ligase TRIP12.
    
 0.943
EmuJ_000785600
Ubiquitin 40S ribosomal protein S27a.
   
 0.931
A0A068Y6I8
Tumor suppressor p53 binding protein 1.
    
 0.894
EmuJ_000887700
Ribosomal protein L40.
    
 0.892
EmuJ_000334400
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.890
EmuJ_000516800
Ubiquitin ribosomal protein L40.
    
 0.888
EmuJ_001073100
Breast cancer type 1 susceptibility protein.
    
 0.849
EmuJ_001028700
BRCT.
   
 0.848
EmuJ_000826900
Alpha 16 fucosyltransferase; Belongs to the glycosyltransferase 23 family.
     
 0.842
A0A068Y1K5
Cullin 3; Belongs to the cullin family.
   
 0.833
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.