STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS7Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
HDID_LOCUS7028
Uncharacterized protein.
   
  
 0.674
HDID_LOCUS4962
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.562
HDID_LOCUS952
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
  
 0.515
A0A0R3SXV5
TYR_PHOSPHATASE_2 domain-containing protein.
   
    0.514
HDID_LOCUS8352
Methyltransf_11 domain-containing protein.
   
  
 0.508
HDID_LOCUS228
Uncharacterized protein; Belongs to the complex I LYR family.
   
  
 0.491
HDID_LOCUS5674
C3H1-type domain-containing protein.
   
  
 0.491
A0A0R3SYG6
SpoU_sub_bind domain-containing protein.
   
  
 0.486
HDID_LOCUS5523
Uncharacterized protein.
   
    0.477
HDID_LOCUS5676
Uncharacterized protein.
   
    0.477
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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