STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS1190RRM domain-containing protein. (346 aa)    
Predicted Functional Partners:
HDID_LOCUS1698
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.984
HDID_LOCUS3749
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.949
HDID_LOCUS3892
MI domain-containing protein.
   
 0.930
HDID_LOCUS2292
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.924
HDID_LOCUS8836
Eukaryotic translation initiation factor 3 subunit A.
   
 0.919
HDID_LOCUS4842
Uncharacterized protein.
    
 0.914
HDID_LOCUS9491
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.914
HDID_LOCUS248
Tr-type G domain-containing protein.
   
 0.911
HDID_LOCUS7716
S1 motif domain-containing protein.
   
 0.896
HDID_LOCUS1300
RRM domain-containing protein.
   
 
 0.888
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.