STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS1212RRM domain-containing protein. (196 aa)    
Predicted Functional Partners:
HDID_LOCUS4454
RRM domain-containing protein.
  
0.982
HDID_LOCUS4582
SAP domain-containing protein.
   
 0.960
HDID_LOCUS2933
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
  
 0.950
HDID_LOCUS572
Uncharacterized protein.
    
 0.927
HDID_LOCUS8820
Uncharacterized protein.
   
 0.926
A0A0R3SWT4
Nuclear cap-binding protein subunit 2.
    
 0.925
HDID_LOCUS9809
Uncharacterized protein.
   
 0.916
HDID_LOCUS1432
Uncharacterized protein.
   
 0.915
HDID_LOCUS4041
Fip1 domain-containing protein.
   
 0.901
HDID_LOCUS9779
Pinin_SDK_memA domain-containing protein.
   
 0.899
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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