HDID_LOCUS1219 protein (Hymenolepis diminuta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDID_LOCUS1219

Profilin; Belongs to the profilin family. (129 aa)

Predicted Functional Partners:

A0A0R3SWR9

0.910

HDID_LOCUS4934

0.909

HDID_LOCUS2819

0.880

HDID_LOCUS7335

0.880

HDID_LOCUS9337

0.866

HDID_LOCUS9303

0.866

HDID_LOCUS1100

0.803

HDID_LOCUS7269

0.803

HDID_LOCUS7757

0.803

HDID_LOCUS9937

0.803

Your Current Organism:

Hymenolepis diminuta

NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3SWR9	HDID_LOCUS1100	A0A0R3SWR9	A0A0R3S9X8	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein.	0.519
A0A0R3SWR9	HDID_LOCUS1219	A0A0R3SWR9	A0A0R3SA64	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Profilin; Belongs to the profilin family.	0.910
A0A0R3SWR9	HDID_LOCUS2819	A0A0R3SWR9	A0A0R3SDP2	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	CAP_N domain-containing protein.	0.685
A0A0R3SWR9	HDID_LOCUS4934	A0A0R3SWR9	A0A0R3SJ21	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein; Belongs to the actin family.	0.999
A0A0R3SWR9	HDID_LOCUS7269	A0A0R3SWR9	A0A0R3SQC8	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein.	0.454
A0A0R3SWR9	HDID_LOCUS7335	A0A0R3SWR9	A0A0R3SQI5	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.736
A0A0R3SWR9	HDID_LOCUS7757	A0A0R3SWR9	A0A0R3SRG2	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein.	0.454
A0A0R3SWR9	HDID_LOCUS9303	A0A0R3SWR9	A0A158QFQ6	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein.	0.468
A0A0R3SWR9	HDID_LOCUS9337	A0A0R3SWR9	A0A0R3SUY1	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	WH1 domain-containing protein.	0.468
A0A0R3SWR9	HDID_LOCUS9937	A0A0R3SWR9	A0A0R3SWA5	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	Uncharacterized protein.	0.519
HDID_LOCUS1100	A0A0R3SWR9	A0A0R3S9X8	A0A0R3SWR9	Uncharacterized protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.519
HDID_LOCUS1100	HDID_LOCUS1219	A0A0R3S9X8	A0A0R3SA64	Uncharacterized protein.	Profilin; Belongs to the profilin family.	0.803
HDID_LOCUS1100	HDID_LOCUS4934	A0A0R3S9X8	A0A0R3SJ21	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.427
HDID_LOCUS1100	HDID_LOCUS9337	A0A0R3S9X8	A0A0R3SUY1	Uncharacterized protein.	WH1 domain-containing protein.	0.592
HDID_LOCUS1219	A0A0R3SWR9	A0A0R3SA64	A0A0R3SWR9	Profilin; Belongs to the profilin family.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.910
HDID_LOCUS1219	HDID_LOCUS1100	A0A0R3SA64	A0A0R3S9X8	Profilin; Belongs to the profilin family.	Uncharacterized protein.	0.803
HDID_LOCUS1219	HDID_LOCUS2819	A0A0R3SA64	A0A0R3SDP2	Profilin; Belongs to the profilin family.	CAP_N domain-containing protein.	0.880
HDID_LOCUS1219	HDID_LOCUS4934	A0A0R3SA64	A0A0R3SJ21	Profilin; Belongs to the profilin family.	Uncharacterized protein; Belongs to the actin family.	0.909
HDID_LOCUS1219	HDID_LOCUS7269	A0A0R3SA64	A0A0R3SQC8	Profilin; Belongs to the profilin family.	Uncharacterized protein.	0.803
HDID_LOCUS1219	HDID_LOCUS7335	A0A0R3SA64	A0A0R3SQI5	Profilin; Belongs to the profilin family.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.880