STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS2155Uncharacterized protein. (731 aa)    
Predicted Functional Partners:
HDID_LOCUS4592
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
   
 0.992
HDID_LOCUS7113
WD_REPEATS_REGION domain-containing protein.
    
 
 0.979
A0A0R3SX73
Sm domain-containing protein.
    
 0.978
HDID_LOCUS1310
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.977
HDID_LOCUS3261
Small nuclear ribonucleoprotein Sm D2.
    
 0.974
HDID_LOCUS4442
Sm domain-containing protein.
    
 0.937
HDID_LOCUS8665
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.902
HDID_LOCUS8827
RNA_GG_bind domain-containing protein.
    
 0.874
HDID_LOCUS9317
RRM domain-containing protein.
  
 0.873
A0A0R3SVU0
Uncharacterized protein.
  
 0.873
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.