STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS3208USP domain-containing protein; Belongs to the peptidase C19 family. (381 aa)    
Predicted Functional Partners:
HDID_LOCUS935
Uncharacterized protein.
    
 0.815
A0A158QFS3
CBF domain-containing protein.
     
 0.768
HDID_LOCUS9409
Uncharacterized protein.
    
 0.706
HDID_LOCUS1248
Rhodanese domain-containing protein.
    
 0.619
HDID_LOCUS1249
Rhodanese domain-containing protein.
    
 0.619
HDID_LOCUS4250
Rhodanese domain-containing protein.
    
 0.619
HDID_LOCUS1485
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
     
 0.615
HDID_LOCUS193
P53 domain-containing protein.
    
 0.603
HDID_LOCUS1619
Uncharacterized protein.
     
 0.589
HDID_LOCUS6382
RING-type domain-containing protein.
      
 0.569
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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