STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS3270BTB domain-containing protein. (1053 aa)    
Predicted Functional Partners:
HDID_LOCUS2717
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.999
HDID_LOCUS3909
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
HDID_LOCUS1619
Uncharacterized protein.
  
 0.984
HDID_LOCUS8750
Tyrosine--tRNA ligase.
  
 0.976
HDID_LOCUS8483
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.954
A0A0R3SXI5
GatB_N domain-containing protein.
  
 0.949
HDID_LOCUS6840
ERCC4 domain-containing protein.
  
 0.936
HDID_LOCUS9607
Structure-specific endonuclease subunit SLX1 homolog; Catalytic subunit of a heterodimeric structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA; Belongs to the SLX1 family.
   
 0.930
HDID_LOCUS980
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
 0.807
HDID_LOCUS7095
Uncharacterized protein.
    
 0.804
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.