STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS3473Uncharacterized protein. (598 aa)    
Predicted Functional Partners:
HDID_LOCUS2935
Uncharacterized protein.
   
 0.998
A0A0R3SY67
PRP1_N domain-containing protein.
   
 0.975
HDID_LOCUS1444
MFAP1 domain-containing protein.
   
 0.970
HDID_LOCUS3039
Tr-type G domain-containing protein.
    
 
 0.919
HDID_LOCUS2665
Uncharacterized protein.
   
 0.911
HDID_LOCUS8179
CPSF_A domain-containing protein.
    
   0.872
HDID_LOCUS8559
Uncharacterized protein.
   
  0.866
HDID_LOCUS8316
Matrin-type domain-containing protein.
    
  0.860
HDID_LOCUS4923
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
  0.821
HDID_LOCUS7804
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
  0.821
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.