STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS3515Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
HDID_LOCUS3533
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.556
HDID_LOCUS9205
Uncharacterized protein.
   
 
 0.473
HDID_LOCUS4951
CSP domain-containing protein.
    
 
 0.431
HDID_LOCUS1825
Uncharacterized protein.
   
 
 0.420
HDID_LOCUS4763
PUM-HD domain-containing protein.
    
 
 0.412
HDID_LOCUS8540
PUM-HD domain-containing protein.
    
 
 0.412
HDID_LOCUS8984
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.408
HDID_LOCUS9013
Uncharacterized protein.
    
 
 0.408
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.