STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS4067Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (358 aa)    
Predicted Functional Partners:
A0A0R3SST2
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 0.911
HDID_LOCUS2391
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.798
HDID_LOCUS64
Uncharacterized protein.
    
  0.798
HDID_LOCUS9051
Uncharacterized protein.
    
  0.798
HDID_LOCUS1873
Uncharacterized protein.
   
 0.793
HDID_LOCUS2667
Nucleolar protein 6.
    
 0.723
HDID_LOCUS8694
Phosphatase tensin-type domain-containing protein.
    
 0.614
HDID_LOCUS8192
RING-type domain-containing protein.
    
 0.594
HDID_LOCUS193
P53 domain-containing protein.
    
 0.592
A0A0R3SDI6
RanBP2-type domain-containing protein.
    
 0.581
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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