STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS4528Uncharacterized protein. (1391 aa)    
Predicted Functional Partners:
HDID_LOCUS9913
Uncharacterized protein.
   
 0.913
HDID_LOCUS1087
Uncharacterized protein.
    
 0.907
HDID_LOCUS8506
Myb_DNA-bind_7 domain-containing protein.
    
 0.820
HDID_LOCUS3248
TFIIB-type domain-containing protein.
   
 
 0.777
HDID_LOCUS2804
Uncharacterized protein.
    
 0.686
HDID_LOCUS8481
Uncharacterized protein.
     
 0.662
HDID_LOCUS2827
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.661
HDID_LOCUS8147
Uncharacterized protein.
     
 0.635
HDID_LOCUS8017
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
     
 0.618
A0A0R3SWN0
Uncharacterized protein.
    
 0.614
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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