STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS4577Tr-type G domain-containing protein. (374 aa)    
Predicted Functional Partners:
HDID_LOCUS8210
Uncharacterized protein.
    
 0.979
HDID_LOCUS5347
EXOSC1 domain-containing protein.
    
 0.977
HDID_LOCUS3279
RNase_PH domain-containing protein.
   
 0.975
HDID_LOCUS2024
RNase_PH domain-containing protein.
    
 0.974
HDID_LOCUS8019
KH_dom_type_1 domain-containing protein.
    
 0.973
HDID_LOCUS4066
RNase_PH domain-containing protein.
    
 0.972
HDID_LOCUS7906
KH_dom_type_1 domain-containing protein.
    
 0.971
HDID_LOCUS7236
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
 
 0.960
HDID_LOCUS5492
RNB domain-containing protein.
   
 0.902
A0A0R3SYX0
Uncharacterized protein.
   
 0.902
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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