STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS5644Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
HDID_LOCUS1606
Uncharacterized protein.
    
 0.953
HDID_LOCUS1042
Uncharacterized protein.
   
 
 0.934
A0A158QE53
Uncharacterized protein.
    
 0.793
HDID_LOCUS9927
GP-PDE domain-containing protein.
  
 0.686
HDID_LOCUS1038
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.649
HDID_LOCUS47
Phosphodiesterase.
     
 0.624
A0A0R3SB37
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.622
HDID_LOCUS3239
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
 
 0.614
HDID_LOCUS3682
Uncharacterized protein.
   
 
  0.609
HDID_LOCUS8393
Uncharacterized protein.
    
 0.599
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.