STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS7368Uncharacterized protein. (361 aa)    
Predicted Functional Partners:
HDID_LOCUS274
Uncharacterized protein.
   
 0.927
HDID_LOCUS1747
LisH domain-containing protein.
   
 0.911
A0A0R3SYH2
CLTH domain-containing protein.
   
 0.892
HDID_LOCUS8789
Uncharacterized protein.
   
 0.885
HDID_LOCUS2965
Uncharacterized protein.
    
 0.871
HDID_LOCUS1191
Uncharacterized protein.
    
   0.674
HDID_LOCUS7469
Protein yippee-like; Belongs to the yippee family.
   
 
 0.666
HDID_LOCUS9874
Yippee domain-containing protein.
   
 
 0.666
HDID_LOCUS166
CTLH domain-containing protein.
    
 0.622
HDID_LOCUS9
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.553
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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