STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS7370Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (185 aa)    
Predicted Functional Partners:
HDID_LOCUS1824
USP7_C2 domain-containing protein.
    
 
 0.660
HDID_LOCUS1097
Uncharacterized protein.
   
 
 0.635
A0A158QG78
Uncharacterized protein.
   
 
 0.575
HDID_LOCUS4968
Uncharacterized protein.
      
 0.569
HDID_LOCUS6377
J domain-containing protein.
      
 0.569
HDID_LOCUS9166
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
 
 0.536
HDID_LOCUS5171
WD_REPEATS_REGION domain-containing protein.
    
 
 0.533
HDID_LOCUS8094
Uncharacterized protein; Belongs to the EMP24/GP25L family.
   
 
 0.517
HDID_LOCUS7793
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.497
HDID_LOCUS8607
Uncharacterized protein.
   
 
 0.472
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.