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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R3SQL8RRM domain-containing protein. (280 aa)    
Predicted Functional Partners:
HDID_LOCUS1432
Uncharacterized protein.
   
 0.920
HDID_LOCUS4892
RRM domain-containing protein.
   
 0.915
HDID_LOCUS1176
Uncharacterized protein.
   
 
 0.912
HDID_LOCUS4034
Uncharacterized protein.
   
 0.873
HDID_LOCUS8820
Uncharacterized protein.
   
 0.872
HDID_LOCUS2480
Uncharacterized protein.
   
 0.865
HDID_LOCUS1212
RRM domain-containing protein.
   
 0.862
A0A158QC55
RRM domain-containing protein.
   
 0.850
HDID_LOCUS3956
PWI domain-containing protein.
   
 0.844
HDID_LOCUS7364
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.843
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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