STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS9061USP domain-containing protein; Belongs to the peptidase C19 family. (2822 aa)    
Predicted Functional Partners:
HDID_LOCUS2512
Ubiquitin-like domain-containing protein.
    
  0.799
HDID_LOCUS1209
MH2 domain-containing protein.
    
 0.744
HDID_LOCUS1365
Mothers against decapentaplegic homolog.
    
 0.744
HDID_LOCUS2726
Ubiquitin-like domain-containing protein.
    
  0.719
HDID_LOCUS4512
HECT domain-containing protein.
   
 
 0.711
A0A158QGC9
Uncharacterized protein.
   
 
 0.694
HDID_LOCUS3092
Uncharacterized protein.
   
 0.682
HDID_LOCUS3160
E3 ubiquitin-protein ligase.
   
 0.682
HDID_LOCUS9518
Uncharacterized protein.
   
 
  0.663
HDID_LOCUS195
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.660
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.