HDID_LOCUS9267 protein (Hymenolepis diminuta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDID_LOCUS9267

NTP_transferase domain-containing protein. (449 aa)

Predicted Functional Partners:

HDID_LOCUS6924

0.989

A0A0R3SXQ3

0.986

A0A0R3SXQ4

0.985

HDID_LOCUS3257

0.980

HDID_LOCUS1121

0.979

HDID_LOCUS4781

0.964

HDID_LOCUS5086

0.960

HDID_LOCUS2417

0.901

HDID_LOCUS254

0.900

HDID_LOCUS7716

0.870

Your Current Organism:

Hymenolepis diminuta

NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3SXQ3	A0A0R3SXQ4	A0A0R3SXQ3	A0A0R3SXQ4	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.944
A0A0R3SXQ3	HDID_LOCUS1121	A0A0R3SXQ3	A0A0R3S9Z2	NTP_transferase domain-containing protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.945
A0A0R3SXQ3	HDID_LOCUS2417	A0A0R3SXQ3	A0A0R3SCT0	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.772
A0A0R3SXQ3	HDID_LOCUS254	A0A0R3SXQ3	A0A0R3S824	NTP_transferase domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.821
A0A0R3SXQ3	HDID_LOCUS3257	A0A0R3SXQ3	A0A158QDL4	NTP_transferase domain-containing protein.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.948
A0A0R3SXQ3	HDID_LOCUS4781	A0A0R3SXQ3	A0A0R3SIL8	NTP_transferase domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.917
A0A0R3SXQ3	HDID_LOCUS5086	A0A0R3SXQ3	A0A0R3SJH3	NTP_transferase domain-containing protein.	Uncharacterized protein.	0.949
A0A0R3SXQ3	HDID_LOCUS6924	A0A0R3SXQ3	A0A0R3SPM1	NTP_transferase domain-containing protein.	NTP_transferase domain-containing protein.	0.884
A0A0R3SXQ3	HDID_LOCUS7716	A0A0R3SXQ3	A0A0R3SRD0	NTP_transferase domain-containing protein.	S1 motif domain-containing protein.	0.870
A0A0R3SXQ3	HDID_LOCUS9267	A0A0R3SXQ3	A0A0R3SUS3	NTP_transferase domain-containing protein.	NTP_transferase domain-containing protein.	0.986
A0A0R3SXQ4	A0A0R3SXQ3	A0A0R3SXQ4	A0A0R3SXQ3	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.944
A0A0R3SXQ4	HDID_LOCUS1121	A0A0R3SXQ4	A0A0R3S9Z2	Uncharacterized protein.	Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.	0.945
A0A0R3SXQ4	HDID_LOCUS2417	A0A0R3SXQ4	A0A0R3SCT0	Uncharacterized protein.	Uncharacterized protein.	0.772
A0A0R3SXQ4	HDID_LOCUS254	A0A0R3SXQ4	A0A0R3S824	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.821
A0A0R3SXQ4	HDID_LOCUS3257	A0A0R3SXQ4	A0A158QDL4	Uncharacterized protein.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.948
A0A0R3SXQ4	HDID_LOCUS4781	A0A0R3SXQ4	A0A0R3SIL8	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.917
A0A0R3SXQ4	HDID_LOCUS5086	A0A0R3SXQ4	A0A0R3SJH3	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0R3SXQ4	HDID_LOCUS6924	A0A0R3SXQ4	A0A0R3SPM1	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.884
A0A0R3SXQ4	HDID_LOCUS7716	A0A0R3SXQ4	A0A0R3SRD0	Uncharacterized protein.	S1 motif domain-containing protein.	0.870
A0A0R3SXQ4	HDID_LOCUS9267	A0A0R3SXQ4	A0A0R3SUS3	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.985