STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS9661SEC7 domain-containing protein. (1923 aa)    
Predicted Functional Partners:
HDID_LOCUS3929
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.957
HDID_LOCUS9274
SEC7 domain-containing protein.
   
 
0.932
HDID_LOCUS7646
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
   
 0.910
HDID_LOCUS5955
Arf-GAP domain-containing protein.
     
 0.877
HDID_LOCUS521
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.876
HDID_LOCUS2554
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.876
HDID_LOCUS3468
Uncharacterized protein.
    
 0.876
HDID_LOCUS7175
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.876
HDID_LOCUS369
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.875
HDID_LOCUS3922
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.873
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.