STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS9982Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
HDID_LOCUS634
Uncharacterized protein.
      
 0.569
HDID_LOCUS1473
BTP domain-containing protein.
   
    0.537
HDID_LOCUS5637
Uncharacterized protein.
   
    0.475
A0A0R3SZK9
Uncharacterized protein.
   
    0.475
HDID_LOCUS8665
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
      
 0.467
HDID_LOCUS1651
Uncharacterized protein.
      
 0.438
HDID_LOCUS7850
Proteasome subunit beta.
      
 0.435
HDID_LOCUS7371
SLBP_RNA_bind domain-containing protein.
   
  
 0.414
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.