Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0R3SXN3 | A0A158QE53 | A0A0R3SXN3 | A0A158QE53 | Histone domain-containing protein. | Uncharacterized protein. | 0.932 |
A0A0R3SXN3 | HDID_LOCUS2851 | A0A0R3SXN3 | A0A158QDE4 | Histone domain-containing protein. | TPR_REGION domain-containing protein. | 0.929 |
A0A0R3SXN3 | HDID_LOCUS3065 | A0A0R3SXN3 | A0A0R3SE89 | Histone domain-containing protein. | Uncharacterized protein. | 0.870 |
A0A0R3SXN3 | HDID_LOCUS3702 | A0A0R3SXN3 | A0A0R3SFR8 | Histone domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.834 |
A0A0R3SXN3 | HDID_LOCUS3704 | A0A0R3SXN3 | A0A0R3SFS0 | Histone domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.893 |
A0A0R3SXN3 | HDID_LOCUS5189 | A0A0R3SXN3 | A0A0R3SJS6 | Histone domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.881 |
A0A0R3SXN3 | HDID_LOCUS5246 | A0A0R3SXN3 | A0A0R3SJY3 | Histone domain-containing protein. | Uncharacterized protein. | 0.929 |
A0A0R3SXN3 | HDID_LOCUS8251 | A0A0R3SXN3 | A0A0R3SSI0 | Histone domain-containing protein. | PHD-type domain-containing protein. | 0.862 |
A0A0R3SXN3 | HDID_LOCUS9213 | A0A0R3SXN3 | A0A0R3SUM8 | Histone domain-containing protein. | Uncharacterized protein; Belongs to the histone H2A family. | 0.850 |
A0A0R3SXN3 | HDID_LOCUS9688 | A0A0R3SXN3 | A0A158QFY2 | Histone domain-containing protein. | ARID domain-containing protein. | 0.919 |
A0A158QE53 | A0A0R3SXN3 | A0A158QE53 | A0A0R3SXN3 | Uncharacterized protein. | Histone domain-containing protein. | 0.932 |
A0A158QE53 | HDID_LOCUS2851 | A0A158QE53 | A0A158QDE4 | Uncharacterized protein. | TPR_REGION domain-containing protein. | 0.906 |
A0A158QE53 | HDID_LOCUS3065 | A0A158QE53 | A0A0R3SE89 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
A0A158QE53 | HDID_LOCUS3702 | A0A158QE53 | A0A0R3SFR8 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.615 |
A0A158QE53 | HDID_LOCUS3704 | A0A158QE53 | A0A0R3SFS0 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.606 |
A0A158QE53 | HDID_LOCUS5189 | A0A158QE53 | A0A0R3SJS6 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.830 |
A0A158QE53 | HDID_LOCUS5246 | A0A158QE53 | A0A0R3SJY3 | Uncharacterized protein. | Uncharacterized protein. | 0.906 |
A0A158QE53 | HDID_LOCUS9213 | A0A158QE53 | A0A0R3SUM8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the histone H2A family. | 0.477 |
A0A158QE53 | HDID_LOCUS9688 | A0A158QE53 | A0A158QFY2 | Uncharacterized protein. | ARID domain-containing protein. | 0.407 |
HDID_LOCUS2851 | A0A0R3SXN3 | A0A158QDE4 | A0A0R3SXN3 | TPR_REGION domain-containing protein. | Histone domain-containing protein. | 0.929 |
page 1 of 5