STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS8334Uncharacterized protein. (750 aa)    
Predicted Functional Partners:
A0A0R3SIU3
SET domain-containing protein.
   
 0.739
HDID_LOCUS8723
WD_REPEATS_REGION domain-containing protein.
    
 0.718
HDID_LOCUS2847
VEFS-Box domain-containing protein.
    
 0.705
A0A158QG86
B30.2/SPRY domain-containing protein.
    
 0.676
HDID_LOCUS235
Uncharacterized protein.
    
 0.675
HDID_LOCUS193
P53 domain-containing protein.
    
 0.658
HDID_LOCUS3704
Histone H2B; Belongs to the histone H2B family.
    
 0.639
HDID_LOCUS1086
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.638
HDID_LOCUS1966
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.636
HDID_LOCUS3702
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.636
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.