STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDID_LOCUS9825RRM domain-containing protein. (123 aa)    
Predicted Functional Partners:
HDID_LOCUS1207
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.999
HDID_LOCUS2771
SF3b1 domain-containing protein.
   
 0.999
HDID_LOCUS8025
Uncharacterized protein.
   
 0.999
HDID_LOCUS8179
CPSF_A domain-containing protein.
    
 0.999
HDID_LOCUS5416
PSP domain-containing protein.
    
 0.998
HDID_LOCUS7033
Uncharacterized protein.
    
 0.998
HDID_LOCUS3628
Matrin-type domain-containing protein.
   
 0.995
HDID_LOCUS1310
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.992
HDID_LOCUS1444
MFAP1 domain-containing protein.
   
   0.987
HDID_LOCUS2473
Uncharacterized protein.
   
 0.986
Your Current Organism:
Hymenolepis diminuta
NCBI taxonomy Id: 6216
Other names: H. diminuta, rat tapeworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.