STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_00424Unannotated protein. (243 aa)    
Predicted Functional Partners:
GCA_000188155_00423
Unannotated protein.
     0.994
GCA_000188155_02828
Unannotated protein.
 
 
 0.912
GCA_000188155_02829
Unannotated protein.
 
 
 0.876
GCA_000188155_00072
Unannotated protein.
  
 
 0.850
GCA_000188155_02830
Unannotated protein.
  
  
 
0.781
GCA_000188155_03371
Unannotated protein.
  
     0.774
GCA_000188155_02902
Unannotated protein.
 
 
 0.764
GCA_000188155_04392
Unannotated protein.
  
 0.718
GCA_000188155_01636
Unannotated protein.
     
 0.493
GCA_000188155_03160
Unannotated protein.
  
 
 0.488
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.