STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_00542Unannotated protein. (591 aa)    
Predicted Functional Partners:
GCA_000188155_00072
Unannotated protein.
 
0.998
GCA_000188155_04446
Unannotated protein.
  
 
 0.909
GCA_000188155_03676
Unannotated protein.
    
  0.869
GCA_000188155_00920
Unannotated protein.
    
   0.812
GCA_000188155_03680
Unannotated protein.
    
   0.810
GCA_000188155_04265
Unannotated protein.
 
 0.804
GCA_000188155_03672
Unannotated protein.
    
   0.796
GCA_000188155_03661
Unannotated protein.
    
   0.793
GCA_000188155_04392
Unannotated protein.
 0.790
GCA_000188155_01407
Unannotated protein.
    
  0.772
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.