STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_01161Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000188155_01156
Unannotated protein.
   0.882
GCA_000188155_01162
Unannotated protein.
       0.830
GCA_000188155_01160
Unannotated protein.
       0.652
GCA_000188155_01159
Unannotated protein.
       0.649
GCA_000188155_02056
Unannotated protein.
    
 
 0.564
GCA_000188155_00072
Unannotated protein.
     
 0.548
GCA_000188155_01688
Unannotated protein.
     
 0.518
GCA_000188155_01473
Unannotated protein.
 
   
 0.508
GCA_000188155_04657
Unannotated protein.
  
    0.476
GCA_000188155_01352
Unannotated protein.
  
     0.474
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.