STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_01346Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_000188155_02278
Unannotated protein.
 
  
  0.751
GCA_000188155_02531
Unannotated protein.
    
 0.726
GCA_000188155_00486
Unannotated protein.
  
  
  0.716
GCA_000188155_03113
Unannotated protein.
  
  
  0.713
GCA_000188155_00846
Unannotated protein.
  
  
  0.711
GCA_000188155_03222
Unannotated protein.
  
     0.706
GCA_000188155_03175
Unannotated protein.
  
  
  0.704
GCA_000188155_02354
Unannotated protein.
  
  
 
0.683
GCA_000188155_01320
Unannotated protein.
  
     0.680
GCA_000188155_02591
Unannotated protein.
    
  0.680
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.