STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_01818Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_000188155_00645
Unannotated protein.
  
  
 0.873
GCA_000188155_00650
Unannotated protein.
  
  
 0.834
GCA_000188155_00646
Unannotated protein.
 
  
 0.803
GCA_000188155_00162
Unannotated protein.
  
    0.770
GCA_000188155_00643
Unannotated protein.
  
  
 0.745
GCA_000188155_04130
Unannotated protein.
   
    0.730
GCA_000188155_00648
Unannotated protein.
  
  
 0.707
GCA_000188155_04295
Unannotated protein.
  
  
 0.707
GCA_000188155_04296
Unannotated protein.
  
  
 0.707
GCA_000188155_01819
Unannotated protein.
       0.608
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.