STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000188155_04115Unannotated protein. (712 aa)    
Predicted Functional Partners:
GCA_000188155_04116
Unannotated protein.
       0.773
GCA_000188155_04117
Unannotated protein.
       0.773
GCA_000188155_04032
Unannotated protein.
  
  
  0.701
GCA_000188155_03781
Unannotated protein.
   
  0.694
GCA_000188155_01109
Unannotated protein.
    
  0.689
GCA_000188155_00773
Unannotated protein.
  
  
 
0.682
GCA_000188155_03098
Unannotated protein.
     
  0.682
GCA_000188155_04377
Unannotated protein.
    
  0.679
GCA_000188155_00181
Unannotated protein.
    
  0.673
GCA_000188155_00353
Unannotated protein.
    
  0.673
Your Current Organism:
Methylocystis sp. ATCC 49242
NCBI taxonomy Id: 622637
Other names: M. sp. ATCC 49242, Methylocystis sp. strain Rockwell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.