STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjgKToxin-antitoxin biofilm protein TabA homolog; Similar to Escherichia coli K12 conserved hypothetical protein gi: 1790702 (617 aa). BLAST with identity of 90% in 252 aa. This CDS has been truncated. The sequence has been checked and is believed to be correct; Belongs to the TabA/YhcH/YiaL family. (150 aa)    
Predicted Functional Partners:
yjgJ
Conserved hypothetical protein.
       0.481
yehT
Conserved hypothetical protein; Member of the two-component regulatory system BtsS/BtsR. BtsR regulates expression of btsT by binding to its promoter region.
  
     0.438
yehU
Putative 2-component sensor protein; Member of the two-component regulatory system BtsS/BtsR. BtsS is a high-affinity receptor for extracellular pyruvate that activates BtsR by phosphorylation.
  
     0.411
Your Current Organism:
Shigella flexneri
NCBI taxonomy Id: 198214
Other names: S. flexneri 2a str. 301, Shigella flexneri 2a str. 301, Shigella flexneri serotype 2a str. 301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.