A0A182REF0 protein (Anopheles funestus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182REF0

Ubiquitin-like domain-containing protein. (1355 aa)

Predicted Functional Partners:

A0A182RVT8

0.990

A0A182R3N7

0.975

A0A182RBJ7

0.971

A0A182RV27

0.967

A0A182RSY7

0.891

A0A4Y0BEH2

0.891

A0A182R4J5

0.889

A0A182RST8

0.831

A0A182RJ99

0.824

A0A182RR35

0.824

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R3N7	A0A182R4J5	Ubiquitin-like domain-containing protein.	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	0.896
A0A182R3N7	A0A182RBJ7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.717
A0A182R3N7	A0A182REF0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.975
A0A182R3N7	A0A182RJ99	Ubiquitin-like domain-containing protein.	UBX domain-containing protein.	0.455
A0A182R3N7	A0A182RR35	Ubiquitin-like domain-containing protein.	UBX domain-containing protein.	0.455
A0A182R3N7	A0A182RSY7	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.694
A0A182R3N7	A0A182RVT8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.947
A0A182R3N7	A0A4Y0BEH2	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.694
A0A182R4J5	A0A182R3N7	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	Ubiquitin-like domain-containing protein.	0.896
A0A182R4J5	A0A182REF0	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	Ubiquitin-like domain-containing protein.	0.889
A0A182R4J5	A0A182RSY7	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	RING-type domain-containing protein.	0.493
A0A182R4J5	A0A182RVT8	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	Uncharacterized protein.	0.996
A0A182R4J5	A0A4Y0BEH2	ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]	RING-type domain-containing protein.	0.493
A0A182RBJ7	A0A182R3N7	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.717
A0A182RBJ7	A0A182REF0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.971
A0A182RBJ7	A0A182RJ99	Uncharacterized protein.	UBX domain-containing protein.	0.952
A0A182RBJ7	A0A182RR35	Uncharacterized protein.	UBX domain-containing protein.	0.992
A0A182RBJ7	A0A182RSY7	Uncharacterized protein.	RING-type domain-containing protein.	0.557
A0A182RBJ7	A0A4Y0BEH2	Uncharacterized protein.	RING-type domain-containing protein.	0.557
A0A182REF0	A0A182R3N7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.975