A0A182RM17 protein (Anopheles funestus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182RM17

28S ribosomal protein S29, mitochondrial. (399 aa)

Predicted Functional Partners:

A0A182R5U0

0.999

A0A182RFK6

0.999

A0A182RKL2

0.999

A0A182RPT9

0.999

A0A4Y0BRA4

0.999

A0A4Y0BRT0

0.999

A0A4Y0BTZ6

0.999

A0A182R4E4

0.998

A0A182R9S4

0.998

A0A182RIW5

0.998

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R4E4	A0A182R5U0	28S ribosomal protein S22, mitochondrial.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.989
A0A182R4E4	A0A182R9S4	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S14, mitochondrial.	0.990
A0A182R4E4	A0A182RFK6	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S11, mitochondrial.	0.994
A0A182R4E4	A0A182RIW5	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S6, mitochondrial.	0.990
A0A182R4E4	A0A182RKL2	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S16, mitochondrial.	0.996
A0A182R4E4	A0A182RM17	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S29, mitochondrial.	0.998
A0A182R4E4	A0A182RPT9	28S ribosomal protein S22, mitochondrial.	28S ribosomal protein S10, mitochondrial.	0.996
A0A182R4E4	A0A4Y0BRA4	28S ribosomal protein S22, mitochondrial.	Uncharacterized protein.	0.992
A0A182R4E4	A0A4Y0BRT0	28S ribosomal protein S22, mitochondrial.	Uncharacterized protein.	0.997
A0A182R4E4	A0A4Y0BTZ6	28S ribosomal protein S22, mitochondrial.	Ribosomal_S7 domain-containing protein.	0.991
A0A182R5U0	A0A182R4E4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S22, mitochondrial.	0.989
A0A182R5U0	A0A182R9S4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S14, mitochondrial.	0.989
A0A182R5U0	A0A182RFK6	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S11, mitochondrial.	0.994
A0A182R5U0	A0A182RIW5	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S6, mitochondrial.	0.999
A0A182R5U0	A0A182RKL2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S16, mitochondrial.	0.999
A0A182R5U0	A0A182RM17	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S29, mitochondrial.	0.999
A0A182R5U0	A0A182RPT9	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	28S ribosomal protein S10, mitochondrial.	0.998
A0A182R5U0	A0A4Y0BRA4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.998
A0A182R5U0	A0A4Y0BRT0	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
A0A182R5U0	A0A4Y0BTZ6	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	Ribosomal_S7 domain-containing protein.	0.998