A0A182RMF6 protein (Anopheles funestus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182RMF6

Uncharacterized protein. (333 aa)

Predicted Functional Partners:

A0A182R7Q9

0.610

A0A182REA1

0.586

A0A182RIX4

0.571

A0A182RPB8

0.571

A0A182R8Y7

0.566

A0A182RKU4

0.563

A0A182RMA2

0.563

A0A182R4N6

0.556

A0A182RPL3

0.543

A0A4Y0BMI5

0.540

Your Current Organism:

Anopheles funestus

NCBI taxonomy Id: 62324
Other names: A. funestus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182R4N6	A0A182R7Q9	ERCC4 domain-containing protein.	dUTPase domain-containing protein.	0.435
A0A182R4N6	A0A182RKU4	ERCC4 domain-containing protein.	SAS-6_N domain-containing protein.	0.908
A0A182R4N6	A0A182RMA2	ERCC4 domain-containing protein.	RPA_C domain-containing protein.	0.949
A0A182R4N6	A0A182RMF6	ERCC4 domain-containing protein.	Uncharacterized protein.	0.556
A0A182R4N6	A0A182RPL3	ERCC4 domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.987
A0A182R4N6	A0A4Y0BMI5	ERCC4 domain-containing protein.	WSC domain-containing protein.	0.936
A0A182R7Q9	A0A182R4N6	dUTPase domain-containing protein.	ERCC4 domain-containing protein.	0.435
A0A182R7Q9	A0A182RIX4	dUTPase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.729
A0A182R7Q9	A0A182RMA2	dUTPase domain-containing protein.	RPA_C domain-containing protein.	0.522
A0A182R7Q9	A0A182RMF6	dUTPase domain-containing protein.	Uncharacterized protein.	0.610
A0A182R7Q9	A0A182RPL3	dUTPase domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.460
A0A182R7Q9	A0A4Y0BMI5	dUTPase domain-containing protein.	WSC domain-containing protein.	0.950
A0A182R8Y7	A0A182REA1	CRC domain-containing protein.	DIRP domain-containing protein.	0.991
A0A182R8Y7	A0A182RIX4	CRC domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.988
A0A182R8Y7	A0A182RMF6	CRC domain-containing protein.	Uncharacterized protein.	0.566
A0A182R8Y7	A0A182RPB8	CRC domain-containing protein.	Uncharacterized protein.	0.989
A0A182REA1	A0A182R8Y7	DIRP domain-containing protein.	CRC domain-containing protein.	0.991
A0A182REA1	A0A182RIX4	DIRP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.994
A0A182REA1	A0A182RMF6	DIRP domain-containing protein.	Uncharacterized protein.	0.586
A0A182REA1	A0A182RPB8	DIRP domain-containing protein.	Uncharacterized protein.	0.997