STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB26079.1Hexosaminidase. (755 aa)    
Predicted Functional Partners:
SKB75176.1
Hexosaminidase.
  
  
 
0.859
SKB64592.1
CubicO group peptidase, beta-lactamase class C family.
    
  0.783
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.632
SKB73864.1
Glycosyl hydrolase family 20, catalytic domain.
  
  
  0.612
SKB73751.1
Hexosaminidase.
  
  
 
0.575
SKB74168.1
Alpha-1,2-mannosidase, putative.
 
     0.559
SKB93533.1
alpha-L-fucosidase.
   
 0.549
SKB27971.1
Hexosaminidase.
  
  
 
0.547
SKB26063.1
Y_Y_Y domain-containing protein.
       0.543
SKB25612.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.512
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.