STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB26088.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
SKB45965.1
Hypothetical protein.
  
     0.730
SKB85167.1
Protein of unknown function.
  
     0.689
SKB88741.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
     0.654
SKB97748.1
Aspartyl protease.
  
     0.625
SKB26168.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
    
 0.617
SKB36159.1
CarboxypepD_reg-like domain-containing protein.
  
     0.610
SKB89218.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
  
     0.599
SKB39124.1
Protein of unknown function.
  
     0.570
SKB97850.1
Cytosine/adenosine deaminase.
  
     0.568
SKB73031.1
Hypothetical protein.
  
     0.558
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.