Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB39404.1 | SKB39412.1 | SAMN05660226_01131 | SAMN05660226_01132 | AhpC/TSA family protein. | Aspartate kinase; Belongs to the aspartokinase family. | 0.643 |
SKB39404.1 | SKB39427.1 | SAMN05660226_01131 | SAMN05660226_01133 | AhpC/TSA family protein. | Protein of unknown function. | 0.642 |
SKB39404.1 | SKB39444.1 | SAMN05660226_01131 | SAMN05660226_01134 | AhpC/TSA family protein. | L-amino acid N-acyltransferase YncA. | 0.690 |
SKB39404.1 | SKB39455.1 | SAMN05660226_01131 | SAMN05660226_01135 | AhpC/TSA family protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.642 |
SKB39404.1 | SKB39467.1 | SAMN05660226_01131 | SAMN05660226_01136 | AhpC/TSA family protein. | Protein of unknown function. | 0.435 |
SKB39404.1 | mutS2 | SAMN05660226_01131 | SAMN05660226_01137 | AhpC/TSA family protein. | DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.490 |
SKB39412.1 | SKB39404.1 | SAMN05660226_01132 | SAMN05660226_01131 | Aspartate kinase; Belongs to the aspartokinase family. | AhpC/TSA family protein. | 0.643 |
SKB39412.1 | SKB39427.1 | SAMN05660226_01132 | SAMN05660226_01133 | Aspartate kinase; Belongs to the aspartokinase family. | Protein of unknown function. | 0.773 |
SKB39412.1 | SKB39444.1 | SAMN05660226_01132 | SAMN05660226_01134 | Aspartate kinase; Belongs to the aspartokinase family. | L-amino acid N-acyltransferase YncA. | 0.862 |
SKB39412.1 | SKB39455.1 | SAMN05660226_01132 | SAMN05660226_01135 | Aspartate kinase; Belongs to the aspartokinase family. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.854 |
SKB39412.1 | SKB39467.1 | SAMN05660226_01132 | SAMN05660226_01136 | Aspartate kinase; Belongs to the aspartokinase family. | Protein of unknown function. | 0.688 |
SKB39412.1 | hisF | SAMN05660226_01132 | SAMN05660226_02887 | Aspartate kinase; Belongs to the aspartokinase family. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.438 |
SKB39412.1 | hisI | SAMN05660226_01132 | SAMN05660226_02888 | Aspartate kinase; Belongs to the aspartokinase family. | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | 0.409 |
SKB39412.1 | metG | SAMN05660226_01132 | SAMN05660226_00424 | Aspartate kinase; Belongs to the aspartokinase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.413 |
SKB39412.1 | mutS2 | SAMN05660226_01132 | SAMN05660226_01137 | Aspartate kinase; Belongs to the aspartokinase family. | DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.581 |
SKB39427.1 | SKB39404.1 | SAMN05660226_01133 | SAMN05660226_01131 | Protein of unknown function. | AhpC/TSA family protein. | 0.642 |
SKB39427.1 | SKB39412.1 | SAMN05660226_01133 | SAMN05660226_01132 | Protein of unknown function. | Aspartate kinase; Belongs to the aspartokinase family. | 0.773 |
SKB39427.1 | SKB39444.1 | SAMN05660226_01133 | SAMN05660226_01134 | Protein of unknown function. | L-amino acid N-acyltransferase YncA. | 0.773 |
SKB39427.1 | SKB39455.1 | SAMN05660226_01133 | SAMN05660226_01135 | Protein of unknown function. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.773 |
SKB39427.1 | SKB39467.1 | SAMN05660226_01133 | SAMN05660226_01136 | Protein of unknown function. | Protein of unknown function. | 0.513 |
page 1 of 4