Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB40382.1 | SKB40392.1 | SAMN05660226_01209 | SAMN05660226_01210 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | Hypothetical protein. | 0.550 |
SKB40382.1 | SKB40402.1 | SAMN05660226_01209 | SAMN05660226_01211 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | Hypothetical protein. | 0.505 |
SKB40382.1 | SKB40411.1 | SAMN05660226_01209 | SAMN05660226_01212 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | Signal transduction histidine kinase. | 0.433 |
SKB40382.1 | cobB | SAMN05660226_01209 | SAMN05660226_01208 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.614 |
SKB40392.1 | SKB40382.1 | SAMN05660226_01210 | SAMN05660226_01209 | Hypothetical protein. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.550 |
SKB40392.1 | SKB40402.1 | SAMN05660226_01210 | SAMN05660226_01211 | Hypothetical protein. | Hypothetical protein. | 0.705 |
SKB40392.1 | SKB40411.1 | SAMN05660226_01210 | SAMN05660226_01212 | Hypothetical protein. | Signal transduction histidine kinase. | 0.594 |
SKB40392.1 | SKB40420.1 | SAMN05660226_01210 | SAMN05660226_01213 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.539 |
SKB40392.1 | cobB | SAMN05660226_01210 | SAMN05660226_01208 | Hypothetical protein. | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | 0.408 |
SKB40402.1 | SKB40382.1 | SAMN05660226_01211 | SAMN05660226_01209 | Hypothetical protein. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.505 |
SKB40402.1 | SKB40392.1 | SAMN05660226_01211 | SAMN05660226_01210 | Hypothetical protein. | Hypothetical protein. | 0.705 |
SKB40402.1 | SKB40411.1 | SAMN05660226_01211 | SAMN05660226_01212 | Hypothetical protein. | Signal transduction histidine kinase. | 0.648 |
SKB40402.1 | SKB40420.1 | SAMN05660226_01211 | SAMN05660226_01213 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.587 |
SKB40411.1 | SKB40382.1 | SAMN05660226_01212 | SAMN05660226_01209 | Signal transduction histidine kinase. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.433 |
SKB40411.1 | SKB40392.1 | SAMN05660226_01212 | SAMN05660226_01210 | Signal transduction histidine kinase. | Hypothetical protein. | 0.594 |
SKB40411.1 | SKB40402.1 | SAMN05660226_01212 | SAMN05660226_01211 | Signal transduction histidine kinase. | Hypothetical protein. | 0.648 |
SKB40411.1 | SKB40420.1 | SAMN05660226_01212 | SAMN05660226_01213 | Signal transduction histidine kinase. | Two component transcriptional regulator, LuxR family. | 0.954 |
SKB40420.1 | SKB40392.1 | SAMN05660226_01213 | SAMN05660226_01210 | Two component transcriptional regulator, LuxR family. | Hypothetical protein. | 0.539 |
SKB40420.1 | SKB40402.1 | SAMN05660226_01213 | SAMN05660226_01211 | Two component transcriptional regulator, LuxR family. | Hypothetical protein. | 0.587 |
SKB40420.1 | SKB40411.1 | SAMN05660226_01213 | SAMN05660226_01212 | Two component transcriptional regulator, LuxR family. | Signal transduction histidine kinase. | 0.954 |
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