STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB41077.1Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family. (146 aa)    
Predicted Functional Partners:
SKB41058.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
SKB41066.1
Isoquinoline 1-oxidoreductase.
 0.999
SKB40992.1
CTP:molybdopterin cytidylyltransferase MocA.
 
 
 0.949
SKB41062.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
    
0.749
SKB74242.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
 0.743
SKB73977.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.708
SKB40989.1
Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
     0.642
SKB40982.1
Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.629
SKB41052.1
Cysteine desulfurase.
       0.572
SKB40949.1
Molybdenum cofactor biosynthesis protein MoaC.
 
   
 0.548
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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