STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB48672.1Capsule assembly protein Wzi. (569 aa)    
Predicted Functional Partners:
SKB48653.1
Capsule assembly protein Wzi.
      
0.718
SKB48689.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.572
SKB48628.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
       0.518
SKB48613.1
Chain length determinant protein.
       0.443
SKB48706.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.434
SKB48720.1
Hypothetical protein.
       0.434
SKB48739.1
Glycosyl transferase family 2.
       0.434
SKB48754.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.434
SKB48767.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.434
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.