STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB48754.1Glycosyltransferase involved in cell wall bisynthesis. (340 aa)    
Predicted Functional Partners:
SKB48767.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.818
SKB48706.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.783
SKB48720.1
Hypothetical protein.
  
    0.783
SKB48739.1
Glycosyl transferase family 2.
  
    0.783
SKB69591.1
Trehalose 6-phosphate synthase/phosphatase.
  
 0.640
SKB68719.1
4-alpha-glucanotransferase/malto- oligosyltrehalose synthase,TIGR02401.
     
 0.615
SKB48689.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.572
SKB26595.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
   
  0.536
SKB68623.1
Maltooligosyltrehalose trehalohydrolase.
   
  0.536
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.536
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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