STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB49195.1Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family. (136 aa)    
Predicted Functional Partners:
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
   
 0.800
SKB84625.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.770
SKB47278.1
Thioredoxin reductase (NADPH).
  
     0.712
SKB39136.1
Bacillithiol biosynthesis deacetylase BshB1.
  
     0.688
SKB27361.1
DinB superfamily protein.
  
     0.663
SKB74450.1
Hypothetical protein.
  
     0.653
SKB50303.1
Protein of unknown function.
  
     0.607
SKB44611.1
DinB superfamily protein.
  
     0.585
SKB94824.1
DinB superfamily protein.
  
     0.487
SKB27374.1
Protein of unknown function.
  
     0.455
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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