STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB49540.13-hydroxyacyl-CoA dehydrogenase. (807 aa)    
Predicted Functional Partners:
SKB45984.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
SKB49524.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
SKB49508.1
Acyl-CoA dehydrogenase.
 
 0.997
SKB68113.1
Signal transduction histidine kinase.
   
 0.991
SKB82312.1
PAS domain-containing protein.
   
 0.990
SKB34889.1
Signal transduction histidine kinase.
    
 0.988
SKB54680.1
PAS domain S-box-containing protein.
    
 0.988
SKB87454.1
PAS domain S-box-containing protein.
    
 0.988
SKB97291.1
PAS domain S-box-containing protein.
    
 0.988
SKB57505.1
Signal transduction histidine kinase.
    
 0.987
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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