STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB50699.1Signal transduction histidine kinase. (688 aa)    
Predicted Functional Partners:
SKB54729.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.878
SKB57505.1
Signal transduction histidine kinase.
   
 0.874
SKB75690.1
Two component transcriptional regulator, LuxR family.
 
  0.874
SKB50715.1
Two component transcriptional regulator, LuxR family.
  
  0.863
SKB40420.1
Two component transcriptional regulator, LuxR family.
  
  0.862
SKB47209.1
Two component transcriptional regulator, LuxR family.
  
  0.862
SKB59088.1
Two component transcriptional regulator, LuxR family.
  
  0.862
SKB74778.1
Two component transcriptional regulator, LuxR family.
  
  0.862
SKB77736.1
Two component transcriptional regulator, LuxR family.
  
  0.862
SKB78994.1
Two component transcriptional regulator, LuxR family.
  
  0.862
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.