STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB54988.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (401 aa)    
Predicted Functional Partners:
SKB55004.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.947
SKB55030.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
   
 0.913
SKB55018.1
Hypothetical protein.
 
     0.901
SKB54946.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
  0.787
SKB89203.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.778
SKB54979.1
Gluconate 2-dehydrogenase subunit 3.
  
    0.774
SKB54970.1
Choline dehydrogenase.
  
    0.729
SKB54936.1
Glycosyl transferase family 2.
 
     0.690
SKB69591.1
Trehalose 6-phosphate synthase/phosphatase.
    
  0.615
SKB55045.1
Outer membrane efflux protein.
       0.614
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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